This book aims to provide a step-by-step tutorial on how to analyse serology data in R, with a particular focus on our Plasmodium vivax serology test and treat (PvSeroTAT) strategy.
The PvSeroApp is a customised application for processing and visualising serological data from Luminex platforms and then applies a random forest algorithm to classify P. vivax serostatus across eight serological exposure markers (see: https://dionnecargy.shinyapps.io/PvSeroApp/).
A tutorial on how to use this can be found in the application itself. The underlying functions are packaged in SeroTrackR, allowing experienced code users to modify their workflows and integrate additional pipelines.